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Two halves of spaghetti squash lasagna topped with melted mozzarella, marinara sauce, and parsley.

Amazing spaghetti squash lasagna in 1 easy bake

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Written by Alex Hayes

October 23, 2025

Welcome! If you’re anything like I was a few years back, the word “lasagna” sounds amazing, but the actual process—all those sticky noodles and heavy layers—can feel like another chore on an already packed day. I get it. Cooking shouldn’t feel stressful; it should feel like pure joy. That’s why I’m thrilled to share this ultimate comfort food makeover: the spaghetti squash lasagna boats. We are swapping out the dense pasta for tender, naturally sweet squash strands, giving you all that classic Italian flavor and cheesy satisfaction, but without weighing you down. Trust me, this recipe proves you don’t need complicated techniques to create something truly exceptional. As I talk about more over on my story page, finding that peace in the kitchen changed everything for me. This is approachable, soul-satisfying cooking designed for everyone—even if you’ve felt like you weren’t a “kitchen person” before!

Why This Spaghetti Squash Lasagna Boats Recipe is Your New Go-To

I know you’re busy, so let’s talk benefits first! This recipe isn’t just a dish; it’s a dinner solution. We’re delivering that warm, cheesy hug of lasagna while keeping things incredibly light and approachable. You absolutely need this in your rotation for weeknight dinners!

  • It’s a fantastic healthy lasagna alternative—no pasta required!
  • Totally gluten-free, making it a great swap for anyone avoiding wheat.
  • It packs a serious protein punch thanks to the ricotta and meat/lentil filling.
  • The “boat” presentation means less cleanup and perfect individual servings.

Essential Components for Your Spaghetti Squash Lasagna

I always say that the secret to making any recipe turn out amazing—especially something like our spaghetti squash lasagna—is making sure you have the right players ready to go before you even turn on the oven. We’re keeping this organized so you aren’t scrambling mid-recipe. Everything is listed below, but pay close attention to how we handle the fillings!

For that perfect roast, you’ll need:

  • 2 medium spaghetti squash
  • 1 tablespoon olive oil, plus more for brushing
  • 1 teaspoon kosher salt, divided
  • 1/2 teaspoon black pepper, divided

Now, for the savory component, you have options! This is where we build that comforting, high-protein base. Remember, we love flexibility here at Pure Cooking Joy:

  • 1 pound ground turkey or ground beef (or if you’re going vegetarian, swap this out for 1 cup cooked lentils—they mix beautifully!)
  • 2 teaspoons Italian seasoning
  • 1/4 teaspoon red pepper flakes (if you like a little warmth!)
  • 2 cloves garlic, minced
  • 24 ounces jar marinara sauce

And finally, the creamy layer that makes it taste like real lasagna. This ricotta mixture is what ties the squash strands together. You’ll need:

  • 15 ounces ricotta cheese (I usually use part-skim, but whole milk packs extra richness!)
  • 1 large egg, lightly beaten (this acts as our binder, don’t skip it!)
  • 1/4 cup grated Parmesan cheese
  • 1/2 teaspoon salt
  • 1/4 teaspoon pepper
  • 1 1/2 cups shredded mozzarella cheese (for topping later!)

Gather everything up, check your measurements twice, and you are ready to move on to the roasting stage. If you’re planning the week out, thinking about your next week’s dinners while you prep this goes so smoothly!

Step-by-Step Guide to Making Spaghetti Squash Lasagna Boats

Okay, Alex here again! This is where the magic happens, where we turn those hard squash halves into amazing, sturdy little edible bowls. We need to keep our focus sharp because timing is everything, especially when roasting vegetables. Don’t worry if you feel rushed; we’ll break this down so you can do it while planning your next amazing comfort food menu!

Roasting the Squash for Perfect Spaghetti Squash Lasagna Strands

First things first: Preheat your oven to 400 degrees F. Safety check! Grab your sharpest knife and carefully cut each spaghetti squash right down the center, lengthwise. Scoop out all those slimy seeds—a regular spoon works great for this. Now, brush the cut sides with a little olive oil and sprinkle them with half of that salt and pepper we measured out. Lay them cut-side down on a baking sheet lined with parchment paper. Let them roast hard at 400°F for about 30 to 40 minutes. My little trick here? You want it tender, but not mushy. If you poke the thickest part with a fork and it meets resistance, that means your strands will hold up beautifully when we load them later. Once they’re done, pull them out and let them cool just enough so you can touch them.

When you pull them out of the oven later for the final bake, remember we are bumping that temperature up to 425 degrees F!

Preparing the Savory Meat/Lentil Base

While that squash is getting tender, let’s build flavor! Grab a skillet and heat up that last tablespoon of olive oil over medium heat. If you’re using meat—turkey or beef—toss it in and cook until it’s nicely browned. Make sure you drain off any big pools of fat; we want savory, not greasy! After the fat is drained, stir in your Italian seasoning, garlic, and those optional red pepper flakes. Cook until you can really smell that garlic popping, maybe just one minute. If you opted for lentils for a vegetarian twist, just skip the meat browning step entirely and move straight into the cheese mixture! In a separate bowl, mix your ricotta, the beaten egg, Parmesan, and the rest of your salt and pepper until it looks smooth and creamy. Then, *gently* fold in that cooked meat or those lentils. That egg is super important; it helps that rich ricotta filling set up nicely when we bake it.

Assembling Your Spaghetti Squash Lasagna Layers

This part is so satisfying! Once the squash is cool enough to handle (wear gloves if your hands are sensitive!), use a fork to scrape out all those beautiful strands. Take care, though! We need to leave about a quarter-inch shell intact around the edges—that’s what makes the “boat”! Mix about 1 cup of your marinara sauce directly into the bowl of squash strands; this coats them perfectly. Now, start layering in the shells. Spoon half of the sauced squash strands back into both boats. Next, divide that hearty ricotta filling evenly on top of the squash layer. Then, pile the rest of your sauced spaghetti squash on top of the ricotta. Finish it off by spooning the rest of your marinara over the very top, and seal the deal with that generous sprinkle of mozzarella cheese.

Tips for the Best Spaghetti Squash Lasagna Texture and Flavor

You’ve got the meat cooked, the cheese mixed, and the squash roasted—fantastic! But if you want this spaghetti squash lasagna to go from “pretty good” to “I can’t believe this is healthy,” we need to talk texture control. The biggest enemy here is water! Squash naturally holds a ton of moisture, and so does ricotta cheese, so we need to be slightly aggressive in managing that if we want a sturdy, lasagna-like bite.

Here’s my insider advice for keeping things firm:

  • The Scrape Test: When you scoop your squash strands out, try not to scrape the green skin of the squash itself; you only want the tender yellow flesh. If the strands look really wet in your bowl after mixing with the sauce, just let them sit on a paper towel-lined plate for about 10 minutes while you finish prepping the boats. It lets some of the excess moisture weep out naturally.
  • Ricotta Management: If your ricotta seems unusually watery, I always drain a little bit of liquid out, or even stir in an extra tablespoon of Parmesan to help soak up anything suspicious. We need structure!
  • The Cheese Finish: For the absolute best, bubbly, browned top, wait until those boats look mostly done—the cheese should be melted—and then give them a quick blast under the broiler for just one minute. Seriously, watch them like a hawk! You want golden-brown spots, not charred cheese disasters. That contrast between the sweet squash and the salty, browned cheese is just *everything*.

Because this dish actually tastes even better the next day when the flavors have married, it’s the perfect star for your weekly prep work. Taking an afternoon to get these assembled makes the week so much easier when you’re trying to stick to your meal planning goals!

Customizing Your Spaghetti Squash Lasagna (Vegetarian and Keto Swaps)

One of the things I love most about coming up with these recipes—moving beyond the standard instructions—is seeing how YOU make them your own! This spaghetti squash lasagna is designed to be flexible because not everyone eats the same way, and that’s okay! We want this comfort food makeover to work for your life, whether that means skipping meat or cutting carbs way down.

Let’s talk swaps so you can tailor this however you need to. And hey, if you love getting creative with diets, you should check out my lighter dessert recipes sometime!

Going Plant-Based: The Vegetarian Spaghetti Squash Lasagna

If you’re looking for a hearty, high-protein vegetarian version, this is dead simple. Remember in the ingredients list when I mentioned using lentils? That’s the easiest switch! Just use 1 cup of cooked lentils instead of the ground meat. They absorb the flavor of the Italian seasoning beautifully and give you that satisfying chew.

However, if lentils aren’t your jam, finely chopped mushrooms are incredible here. Sauté about 8 ounces of cremini or button mushrooms until they release all their water and start to brown nicely before mixing them in with your ricotta. They add an amazing earthy depth that complements the sweet squash perfectly. You get that rich texture without needing any meat at all!

Adapting for a Strict Keto Lasagna Recipe

When you’re aiming for the lowest carb count possible, the squash is already doing most of the heavy lifting for you, which is great! But we need to look closely at the other things hiding carbs.

The main area to watch is your marinara sauce. Many commercial sauces sneak in tons of sugar, totally blowing your carb budget. Always read the label! Look for a sauce with 5 grams of sugar or less per half-cup serving, or better yet, use a no-sugar-added variety. Making your own simple tomato sauce is actually super fast if you have canned crushed tomatoes—it’s worth the five minutes!

Also, when mixing that ricotta filling, make sure you are using full-fat cheeses. For a strict keto lasagna recipe, you want those healthy fats, so skip any part-skim dairy choices here. It makes the filling richer and keeps you feeling full longer, which is the whole point of low carb comfort food, right?

Texture Tweaks: Keeping It Firm

Sometimes, even when we try to manage moisture, things can get a little looser than we want, especially if mixing in veggies that weep a lot of water, like spinach. If you decide to add chopped spinach, make sure you wilt it down completely and really squeeze out every last drop of water before folding it into that ricotta mix, even if you’re using meat.

If you find your overall filling seems a bit runny before layering, just stir in an extra tablespoon of Parmesan cheese. That extra hard cheese acts like a sponge and helps everything bind up beautifully when it bakes. It’s an easy fix that saves you from soggy layers!

Storing and Reheating Your Low Carb Lasagna Bake

Now, let’s talk about the best part about making a big, delicious dish like this spaghetti squash lasagna: leftovers! Seriously, this dish is proof that healthy eating doesn’t mean eating sad sad salads every night. This recipe transforms into an even better second-day meal, living up to its reputation as a fantastic low carb lasagna bake.

If you followed my make-ahead tip in the notes earlier, you might already have these covered! But whether you prepped them ahead or just have extra after dinner, here’s how to handle the storage.

Refrigerating Your Lasagna Boats

For leftovers, you want separation, not mush! If you assembled the boats fully but didn’t bake them yet, that’s great for storing. Cover those beauties tightly with plastic wrap or aluminum foil. They’ll keep happily in the fridge for up to two full days. Remember, when you do bake them straight from the fridge, the center will be cold, so you’ll definitely need those extra 5 to 10 minutes of baking time we talked about.

Once they are baked, let them cool completely before storing them. Store the cooled, cooked boats in an airtight container. They hold up really well for about 3 to 4 days in the refrigerator. The strands might soak up a tiny bit more sauce as they sit, which isn’t a bad thing when you’re craving comfort food!

The Best Way to Reheat

Microwaving works in a pinch, but honestly, for the best texture, I always recommend the oven or even an air fryer if you have one. You want to bring back that bubbly cheese crust!

Oven Method: Place your individual boat (or halves of a boat) on a small oven-safe dish. Cover it loosely with foil—this stops the cheese from burning while the middle heats up. Pop it into a 350 degree F oven for about 15 to 20 minutes, depending on how massive your serving is. When the internal temperature feels hot all the way through, you’re golden.

Air Fryer Tip: If you’re reheating just one boat, the air fryer is amazing! Set it to 325 degrees F for about 8 to 10 minutes. It reheats quickly and crisps up that top layer of mozzarella perfectly, making it taste almost freshly baked. Just watch closely so it doesn’t dry out!

I try not to freeze these once they are fully assembled and baked, just because the squash strands can get a little texturally off after thawing. If you must freeze, assemble them raw, but I find they are best eaten within the first few days!

Frequently Asked Questions About This Healthy Lasagna Alternative

That’s completely fair! When you try a new approach to a classic comfort dish like this spaghetti squash lasagna, questions are going to pop up. I always try to answer the things that bugged me when I first tested this recipe. Think of these as the little tweaks that turn a good meal into one you’ll want to make over and over again. I want you to feel totally confident making this! You can check out my general tips over in my soup and salad section for pairing ideas too!

Can I use zucchini or eggplant instead of spaghetti squash?

That’s a great question if you’ve got a ton of summer squash lying around! While you absolutely *can* use zucchini or eggplant, the results won’t be identical—and you need a slight adjustment in method. Zucchini and eggplant release way more water than spaghetti squash when cooked. If you try to use them raw as a swap, your whole boat will turn soupy. You would need to slice the zucchini or eggplant thinly, salt it heavily, let it sit for 30 minutes to draw out the moisture, pat it super dry, and then maybe even roast or grill it slightly before layering it in. Honestly, for the best, most reliable result with minimal stress, stick to the squash for this recipe. It holds the fillings so much better!

What cheese works best if I don’t want to use ricotta?

Ricotta is traditional, but sometimes you don’t have it on hand or just don’t love the texture. If you need a replacement for the cheesy, creamy layer in this low carb comfort food, cottage cheese is my favorite substitute! Many people use cottage cheese because it’s super high in protein. Just use the same amount (15 ounces), but make sure you blend it really well first, maybe with an immersion blender if you can, until it gets smooth, or it will feel grainy. Alternatively, if you want a truly gooey, non-ricotta feel, you can skip the separate ricotta mixture entirely. Just layer thick slices of mozzarella and provolone right on top of the sauced squash strands before the top mozzarella layer. It gives you that classic layered look but swaps the creamy binder for straight-up meltiness.

Can I really make this ahead of time?

Yes! And honestly, I highly recommend it! This is one of those great dishes that benefits from being assembled a day ahead, which is why it’s perfect for when you’re doing some meal planning on Sunday. You can assemble the entire spaghetti squash lasagna boats right up until that final mozzarella sprinkle. Cover them tightly, keep them in the fridge, and when you’re ready to bake them for dinner, follow the instructions, but add an extra 5 to 10 minutes to that final bake time, as noted in the recipe details. They come out smelling amazing, and you saved yourself 20 minutes of prep time on a busy weeknight!

Is this appropriate for a keto lasagna recipe?

It’s already extremely close! Because we are using spaghetti squash instead of pasta, we have already cut out tons of carbs. To officially make this a strict keto lasagna recipe, you only need to confirm two main things. First, check your marinara sauce; most store-bought sauces have added sugar, so look for a brand with very low or zero added sugar per serving. Second, use full-fat dairy only—that means full-fat ricotta and full-fat mozzarella. Skip anything labeled “part skin.” If you watch those two elements, this whole **cheesy vegetable casserole** fits perfectly into most keto structures. It’s an awesome way to satisfy those Italian cravings without breaking your low-carb commitment!

Serving Suggestions for Your Italian Squash Bake

Okay, we’ve got this gorgeous, hearty, cheesy italian squash bake ready to go. While these boats are absolutely glorious and stand totally strong as a complete meal on their own—seriously, the ricotta and meat make them a true high protein dinner idea—sometimes you just want a little something fresh on the side to cut through the richness, right? I love balancing that savory, saucy flavor profile with something crisp and green.

This recipe doesn’t need a ton of heavy sides because the squash itself does the heavy lifting! But here are a few things I turn to when I’m plating up our spaghetti squash lasagna:

Simple Green Salads Are Your Best Friend

You can never go wrong with a bright, acidic salad to complement rich Italian flavors. Forget the heavy, mayo-laden stuff here; we want something clean.

  • Arugula with Lemon Vinaigrette: Arugula has that peppery bite that tastes fantastic next to mozzarella and tomato sauce. Toss it simply with fresh lemon juice, good olive oil, salt, and maybe a tiny pinch of dried oregano. It’s practically ready in two minutes.
  • Classic Caesar (Lightened Up): If you need that salty crunch, use a Caesar dressing that’s lighter on the oil or make your own simple vinaigrette. Lots of fresh parmesan shavings go perfectly with this!

Roasted Vegetables That Don’t Compete

If you have the oven on anyway (which we do for the final bake!), why not toss some veggies in there? They roast up nicely right alongside your boats, or perhaps right before them if you’re planning ahead.

My absolute favorite companion for this dish is my recipe for roasted broccoli or Brussels sprouts. If you check out my guide on roasting Brussels sprouts until crispy, you’ll see that a nice char and a little salt make them the perfect earthy counterpoint to the sweet squash. You don’t need to drown them in butter, either—a little olive oil and salt is all you need to make them addictive!

Honestly, sometimes I just stop there. A side salad and the boats, and dinner is done. It feels like a complete, cozy, Italian-inspired meal without feeling like you need to go lie down afterward. Dig in!

Nutritional Estimates for Spaghetti Squash Lasagna

I always want to share this information with you because knowing what goes into your body is part of that pure cooking joy we talk about! But before we get into the numbers, I need to give you the standard disclaimer: these figures are just estimates. Seriously, they change based on whether you use lean ground turkey versus fattier ground beef, or if you splurge on whole-milk ricotta versus part-skim. These are based on the standard recipe using part-skim ricotta and ground turkey, so adjust based on your choices!

This is truly why focusing on *great ingredients* rather than just counting macros is my philosophy here. We’re creating honest food, not chasing obsessive numbers. But for those of you who like to plan, here’s a general breakdown per serving (which is one boat):

  • Calories: About 580 for one boat. That feels really reasonable for such a hearty, cheesy dinner, right?
  • Protein: This is where it shines! We’re looking at around 40 grams of protein per serving. That high-protein hit is why this dish keeps you satisfied for hours.
  • Carbohydrates: Total carbs usually land around 45 grams, but don’t forget—that includes 8 grams of filling fiber coming from the squash strands! It’s way lower than traditional pasta lasagna.
  • Fat: We’re clocking in around 28 grams of fat. Remember, a good portion of that comes from the cheese, which is essential for that lasagna melt factor!

If you swap to fattier meat or full-fat cheese, those numbers, especially the fat and calorie counts, will naturally creep up, but you’ll get maximum richness. If you’re using leaner options aiming for a lower-fat version, the protein stays high, but the fat drops down. It all depends on what you’re aiming for that week!

Share Your Pure Cooking Joy

I truly hope you loved making this spaghetti squash lasagna boats recipe as much as I love eating the leftovers! Taking a classic dinner and turning it into a lighter, fresher version is what Pure Cooking Joy is all about, and I want to hear how it turned out in your kitchen. Did the squash strands hold up well? Did your family notice the difference between this and regular lasagna?

Don’t keep your success a secret! I really, really love reading your feedback and seeing your beautiful creations. It makes my day to know I’ve inspired you to step into the kitchen and create something delicious without the stress.

Rate and Review Your Lasagna Boats

If you followed along and had a great dinner experience, please take just one minute to click the star rating above or leave a quick comment below telling me what you thought. Your feedback not only helps other readers feel confident trying this healthy lasagna alternative, but it also helps me keep refining these recipes to make them the best they can be.

Was there a specific cheese combination you loved? Did you add extra garlic? Tell me everything! Every little note helps the next person master this easy weeknight squash meal.

Show Me Your Spaghetti Squash Lasagna!

If you snapped a picture while assembling, roasting, or sitting down to eat your finished low carb lasagna bake, I’d be thrilled if you shared it! Tagging me on social media is the best way for me to cheer you on.

If you’re hanging out online, come find me! I love connecting with everyone over food, and you can always follow along for behind-the-scenes kitchen action, quick tips, and spontaneous recipe ideas. You can connect with me and the community over on Facebook right here: Pure Cooking Joy on Facebook.

Thank you so much for cooking with me today. Come back soon for more simple, soul-satisfying food!

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Spaghetti Squash Lasagna Boats: Simple Comfort Food Makeover

Close-up of baked spaghetti squash lasagna halves topped with melted mozzarella cheese and herbs.

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Make satisfying, low-carb Spaghetti Squash Lasagna Boats. This recipe swaps pasta for tender squash, offering a flavorful, gluten-free alternative to classic lasagna that is perfect for weeknight dinners.

  • Author: purejoyalex
  • Prep Time: 20 min
  • Cook Time: 55 min
  • Total Time: 75 min
  • Yield: 2 servings 1x
  • Category: Dinner
  • Method: Baking
  • Cuisine: Italian-American
  • Diet: Low Fat

Ingredients

Scale
  • 2 medium spaghetti squash
  • 1 tablespoon olive oil, plus more for brushing
  • 1 teaspoon kosher salt, divided
  • 1/2 teaspoon black pepper, divided
  • 1 pound ground turkey or ground beef (or 1 cup cooked lentils for vegetarian)
  • 2 teaspoons Italian seasoning
  • 1/4 teaspoon red pepper flakes (optional)
  • 2 cloves garlic, minced
  • 24 ounces jar marinara sauce
  • 15 ounces ricotta cheese (part-skim or whole milk)
  • 1 large egg, lightly beaten
  • 1/4 cup grated Parmesan cheese
  • 1/2 teaspoon salt
  • 1/4 teaspoon pepper
  • 1 1/2 cups shredded mozzarella cheese

Instructions

  1. Preheat your oven to 400 degrees F. Cut each spaghetti squash in half lengthwise. Scoop out the seeds.
  2. Brush the cut sides of the squash halves lightly with olive oil and sprinkle with 1/2 teaspoon salt and 1/4 teaspoon pepper. Place the squash cut-side down on a baking sheet lined with parchment paper.
  3. Roast for 30 to 40 minutes, or until the squash is tender when pierced with a fork. Remove from the oven and let cool slightly. Increase oven temperature to 425 degrees F.
  4. While the squash cools, prepare the filling. Heat 1 tablespoon of olive oil in a skillet over medium heat. Add ground meat (if using) and cook until browned. Drain excess fat.
  5. Stir in the Italian seasoning, red pepper flakes, and minced garlic. Cook for 1 minute until fragrant. If using lentils, skip this step and proceed to mixing the cheese filling.
  6. In a medium bowl, combine the ricotta cheese, Parmesan cheese, beaten egg, 1/2 teaspoon salt, and 1/4 teaspoon pepper. Mix well. If you used meat, gently fold the meat mixture into the ricotta mixture.
  7. Once the squash is cool enough to handle, use a fork to scrape out the strands, leaving about a 1/4-inch shell intact for the boat. Place the strands in a bowl.
  8. Mix about 1 cup of marinara sauce into the spaghetti squash strands.
  9. Spoon half of the squash mixture back into the two squash shells, creating a base layer. Top evenly with the ricotta filling mixture.
  10. Spoon the remaining squash mixture over the ricotta layer. Pour the remaining marinara sauce over the top layer.
  11. Sprinkle evenly with the mozzarella cheese.
  12. Bake at 425 degrees F for 15 to 20 minutes, or until the cheese is melted and bubbly. Let rest for 5 minutes before serving.

Notes

  • For an easy meal prep option, assemble the boats completely, cover them tightly, and refrigerate for up to 2 days before baking. Add 5-10 minutes to the baking time if cooking straight from the refrigerator.
  • If you are following a specific diet, consider using a low-sugar marinara sauce or making your own sauce to control sodium content. This recipe works well with a keto meal plan delivery approach if you omit the optional red pepper flakes and use full-fat cheese.
  • To make this vegetarian, skip the meat and use 1 cup of cooked lentils or finely chopped mushrooms mixed into the ricotta filling.

Nutrition

  • Serving Size: 1 boat
  • Calories: 580
  • Sugar: 14
  • Sodium: 850
  • Fat: 28
  • Saturated Fat: 15
  • Unsaturated Fat: 13
  • Trans Fat: 1
  • Carbohydrates: 45
  • Fiber: 8
  • Protein: 40
  • Cholesterol: 110

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Hi, I'm Alex! I believe incredible food doesn't have to be complicated. Here at Pure Cooking Joy, I share delicious, approachable recipes designed to bring happiness back into your kitchen. Let's get cooking!

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